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n2p2 - A Neural Network Potential Package

GNU nano is a small and friendly text editor. Besides basic text editing, nano offers features like undo/redo, syntax coloring, interactive search-and-replace, auto-indentation, line numbers, word completion, file locking, backup files, and internationalization support.

Filtering and trimming of Oxford Nanopore Sequencing data

Signal-level algorithms for MinION data

Napari is a fast, interactive, multi-dimensional image viewer for Python. It's designed for browsing, annotating, and analyzing large multi-dimensional images.

AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences.

NCBI Datasets command-line clients

In Nemo-age, it is possible to model genetic and phenotypic evolution in populations with, for instance, overlapping generations, a seed bank, and multiple age classes with stage-specific transition rates, fecundities, selection pressures, and dispersal rates, among other things.

Unidata NetCDF Fortran Library

SARS-CoV-2 genome clade assignment, mutation calling, and sequence quality checks

NextDenovo is a string graph-based de novo assembler for long reads.

A DSL for data-driven computational pipelines http://nextflow.io

The Nextstrain command-line interface (CLI)—a program called nextstrain—aims to provide a consistent way to run and visualize pathogen builds and access Nextstrain components like Augur and Auspice across computing environments such as Docker, Conda, and AWS Batch.

A DSL for data-driven computational pipelines http://nextflow.io

NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction.

Estimate average coverage and create curves for metagenomic datasets

automatically generates schematic diagrams of protein-nucleic acid interactions for a given PDB file